Stem-loop cfa-mir-6516

Accession

MI0027991

Description

Canis familiaris cfa-mir-6516 precursor miRNA

Gene family

MIPF0001672; mir-6516

Sequence

ggcccaguuccccccgggguuuggaUUUGCAGUAACAGGUGUGAACAUUCuagcagcaguuugaugaucauguaugauacugcaaacaggacccgcgcggaggucuggcuuccgc
((.((((..((.((((((((((.(.(((((((((.((..(((((.((((..(((....))).)))).)))))..)).)))))))))).)))))).)).)).)).))))...))..

Structure

--  --c    uu  c  -  -      g a         A  GG     A    Cu   a 
  gg   ccag  cc cc cg ggguuu g UUUGCAGUA CA  UGUGA CAUU  agc g
  ||   ||||  || || || |||||| | ||||||||| ||  ||||| ||||  |||  
  cc   gguc  gg gg gc cccagg c aaacgucau gu  guacu guag  uug c
cg  uuc    -u  a  c  g      a -         a  au     a    -u   a 

Annotation confidence Not enough data

Genome context

chr9: 3776763-3776877 [-]

Mature cfa-miR-6516

• Accession: MIMAT0034393
• Description: Canis familiaris cfa-miR-6516 mature miRNA
• Sequence: 26 - UUUGCAGUAACAGGUGUGAACAUUC - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545