Stem-loop cfa-mir-8873b

Accession

MI0027993

Description

Canis familiaris cfa-mir-8873b precursor miRNA

Gene family

MIPF0001952; mir-8873

Sequence

guccgggcccugcgcugcuggaauugugcucccggccgcggcuccugaaggcagcaggugcagcccccuccgcguggagcUGCGACCUGAGCUGCUUCUGAGGCCccaccaggugugcgcuccagcccuuuaccgcgcuugcccg
...(((((...((((.((((((..(((((.((.((..(.((((.(.((((.(((((((((((((.((........)).))))).))))..)))))))).).)))))..)).)).))))).))))))........))))..)))))

Structure

guc     ccu    -------u      au     u  c  cc c    c u    g    --    -     c  cuc 
   cgggc   gcgc        gcugga  ugugc cc gg  g ggcu c gaag cagc  aggu gcagc cc   c
   |||||   ||||        ||||||  ||||| || ||  | |||| | |||| ||||  |||| ||||| ||    
   gcccg   cgcg        cgaccu  gcgug gg cc  c CCGG G CUUC GUCG  UCCA CGUcg gg   g
---     -uu    ccauuucc      -c     u  a  ac -    A U    -    AG    G     a  ugc 

Annotation confidence Not enough data

Genome context

chr1: 44444979-44445123 [-]

Mature cfa-miR-8873b

• Accession: MIMAT0034395
• Description: Canis familiaris cfa-miR-8873b mature miRNA
• Sequence: 81 - UGCGACCUGAGCUGCUUCUGAGGCC - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545