miRBase entry: cfa-mir-8892

Stem-loop cfa-mir-8892


Accession
MI0027997
Description
Canis familiaris cfa-mir-8892 precursor miRNA


Sequence

gauucaaaggucagcuccaagguuccgaacuggggcccgggaugugagggguuucagagccuaaauucccUAGUCUGUAGCCCCGGCCCCCGAAUcccacccgagcggggccuuccuuuucccaa
.....(((((...(((((...((((.(...(((((..((((..((..((((((.((((..(((.......))))))).)))))).)).))))..))))).).)))))))))...)))))......

Structure
-gauuc     uca     aag    c aac     cc    au  ga      u    gc   aa 
      aaagg   gcucc   guuc g   ugggg  cggg  gu  gggguu caga  cua  u
      |||||   |||||   |||| |   |||||  ||||  ||  |||||| ||||  |||  u
      uuucc   cgggg   cgag c   acccU  GCCC  CG  CCCCGA GUCU  GAU  c
aacccu     uuc     ---    c --c     AA    -C  -G      U    --   cc 


Annotation confidence Not enough data
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Genome context
chr1: 113031313-113031437 [+]

Database links

Mature cfa-miR-8892

Accession MIMAT0034399
Description Canis familiaris cfa-miR-8892 mature miRNA
Sequence 71 - UAGUCUGUAGCCCCGGCCCCCGAAU - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545