miRBase entry: cfa-mir-8899

Stem-loop cfa-mir-8899


Accession
MI0028010
Description
Canis familiaris cfa-mir-8899 precursor miRNA


Sequence

gggcgggauggggggaugucagucaccccuGUUGGGGUCCAUGCGUCUAGGACaggcuggaaaggucauggcuugggugccugcacagcacagggcuuacaggggagcaggggucccgggg
............(((((.((.((..(((((((..((((((.((.(.((.(..(((((....(((.......)))....)))))..)))).))))))))))))))).)).)).)))))....

Structure
gggcgggauggg     g  a  ca       UG      A  C U  A GA     ugga   gu 
            gggau uc gu  ccccuGU  GGGUCC UG G CU G  Caggc    aag  c
            ||||| || ||  |||||||  |||||| || | || |  |||||    |||  a
            cccug gg cg  ggggaca  uucggg ac c ga c  guccg    uuc  u
--------gggg     g  a  -a       --      -  a -  - ac     uggg   gg 


Annotation confidence Not enough data
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Genome context
chr3: 91886956-91887076 [+]

Database links

Mature cfa-miR-8899

Accession MIMAT0034409
Description Canis familiaris cfa-miR-8899 mature miRNA
Sequence 31 - GUUGGGGUCCAUGCGUCUAGGAC - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545