miRBase entry: cfa-mir-1296

Stem-loop cfa-mir-1296


Accession
MI0028014
Description
Canis familiaris cfa-mir-1296 precursor miRNA
Gene family
MIPF0000649; mir-1296


Sequence

ugaaaucagcgaauaaccuaccuaacuggaUUAGGGCCCUGGCUCCAUCUCCUUUaggaaaaccuucuguggggaguggggcuuugacccuaacccagcugggcuguaacacugcugcauuuucu
.((((((((((......(..((((.((((.((((((....(((((((.((((((..((((....))))..)))))))))))))....)))))).)))).))))..)......))))).)))))..

Structure
-u     -     aauaac ua    a    a      CCCU       U      Ua    a 
  gaaau cagcg      c  ccua cugg UUAGGG    GGCUCCA CUCCUU  ggaa a
  ||||| |||||      |  |||| |||| ||||||    ||||||| ||||||  ||||  
  uuuua gucgu      g  gggu gacc aauccc    ucggggu gagggg  ucuu c
uc     c     cacaau uc    c    c      aguu       -      ug    c 


Annotation confidence Not enough data
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Genome context
chr4: 15180088-15180212 [-]

Database links

Mature cfa-miR-1296

Accession MIMAT0034413
Description Canis familiaris cfa-miR-1296 mature miRNA
Sequence 31 - UUAGGGCCCUGGCUCCAUCUCCUUU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545