miRBase entry: cfa-mir-507b

Stem-loop cfa-mir-507b

Accession

MI0028017

Description

Canis familiaris cfa-mir-507b precursor miRNA

Gene family

MIPF0000130; mir-506

Sequence

uuaaccaaacuuugugcagugccccauucaaaaaggugccauucagguauacuaaaauaugAUUGGCACUUUUUUGAGUGUGguaauucacaacauguacaaccaca
...........(((((...((((.(((((((((((((((((.(((.((........)).))).))))))))))))))))).))))...)))))..............

Structure

---uuaaccaaacu     cag    c                 u   g  aua 
              uugug   ugcc cauucaaaaaggugcca uca gu   c
              |||||   |||| ||||||||||||||||| ||| ||    
              aacac   augG GUGAGUUUUUUCACGGU Agu ua   u
acaccaacauguac     uua    U                 U   a  aaa

Annotation confidence Not enough data

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Genome context

chrX: 115665368-115665474 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cfa-mir-507b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-507b

Accession	MIMAT0034416
Description	Canis familiaris cfa-miR-507b mature miRNA
Sequence	62 - AUUGGCACUUUUUUGAGUGUG - 82
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545