miRBase entry: cfa-mir-508b

Stem-loop cfa-mir-508b

Accession

MI0028027

Description

Canis familiaris cfa-mir-508b precursor miRNA

Gene family

MIPF0000130; mir-506

Sequence

cugaguguagugcucuacuugagagggugacauucacagauacuggacaUGACUGUCACCUUUUUUGAGUACAguaaugcaca
....(((((.((((.(((((((((((((((((.((((((...)))....))).))))))).)))))))))).)))).))))).

Structure

cuga     g    c          -       u   ----   a 
    gugua ugcu uacuugagag ggugaca uca    cag  
    ||||| |||| |||||||||| ||||||| |||    ||| u
    cacgu augA AUGAGUUUUU CCACUGU AGU    guc  
---a     a    C          U       C   acag   a

Annotation confidence Not enough data

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Genome context

chrX: 115658599-115658681 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cfa-mir-508b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-508b

Accession	MIMAT0034425
Description	Canis familiaris cfa-miR-508b mature miRNA
Sequence	50 - UGACUGUCACCUUUUUUGAGUACA - 73
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545