miRBase entry: cfa-mir-8791b

Stem-loop cfa-mir-8791b


Accession
MI0028032
Description
Canis familiaris cfa-mir-8791b precursor miRNA
Gene family
MIPF0001882; mir-8791


Sequence

ccugaucuguucagcucggggccgccuggaggcuggggugUUCUUGCUGUCCUGUGCCCUCCUGGcuucugccuguuccagggggagcgccggauauugggcuguuuccggcacccugugcccccgggccugcacuguuggaauc
.(((((..((.((((((((((.(((..((..(((((((.((((....(((((.((((((((((((...(.....)..)))))))).)))).)))))..))))...)))))))..)).))).))))))).))).)).)))))....

Structure
---c     cu  u   -       c   cu  ag       --u    UUGC     U    -        cuu u 
    cugau  gu cag cucgggg cgc  gg  gcugggg   gUUC    UGUCC GUGC CCUCCUGG   c g
    |||||  || ||| ||||||| |||  ||  |||||||   ||||    ||||| |||| ||||||||   | c
    gguug  ca guc gggcccc gug  cc  cggccuu   cggg    auagg cgcg gggggacc   g c
cuaa     -u  c   c       c   -u  ca       ugu    --uu     c    a        -uu u 


Annotation confidence Not enough data
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Genome context
chrX: 43758547-43758691 [+]

Database links

Mature cfa-miR-8791b

Accession MIMAT0034430
Description Canis familiaris cfa-miR-8791b mature miRNA
Sequence 41 - UUCUUGCUGUCCUGUGCCCUCCUGG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545