miRBase entry: cfa-mir-8834b

Stem-loop cfa-mir-8834b


Accession
MI0028033
Description
Canis familiaris cfa-mir-8834b precursor miRNA


Sequence

acacuacuggcggcagccagcucuccagcucuggagucagcucccgcaguaacuaccgaagcuuccaguucgcgcuggccUGGAUGCUCAGUCAGCGGGGGUGCUgaacugcacagcuugggggcaccugguggcaggagcgucc
......(((((....)))))..((((((((.((.(((((((((((((....(((...((.((.(((((...((....))))))).)))))))..))))))..)))).))).)).))).)))))((.((((....)))).))....

Structure
acacuacuggcggcagccagcu     -   c  g   -    --      agua   acc  a  u     uuc  g 
                      cucca gcu ug agu cagc  ucccgc    acu   ga gc uccag   gc c
                      ||||| ||| || ||| ||||  ||||||    |||   || || |||||   ||  
                      ggggu cga ac uca gUCG  GGGGCG    UGA   CU CG AGGUc   cg u
ccugcgaggacggugguccacg     u   c  g   a    UG      --AC   ---  -  U     ---  g 


Annotation confidence Not enough data
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Genome context
chrX: 47487713-47487857 [+]

Database links

Mature cfa-miR-8834b

Accession MIMAT0034431
Description Canis familiaris cfa-miR-8834b mature miRNA
Sequence 81 - UGGAUGCUCAGUCAGCGGGGGUGCU - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545