miRBase entry: cfa-mir-507a

Stem-loop cfa-mir-507a


Accession
MI0028035
Description
Canis familiaris cfa-mir-507a precursor miRNA
Gene family
MIPF0000130; mir-506


Sequence

gguuugugcgggaucaccaccuuuaccuauggugugugcagugcuccacuucaggaagugccauccauguagcuaaaaccUAUGAUUGGCACCUCUUUGAGUGUAgcaaugugcaacagguacaacaucagugcuggcccugaaa
(((((.....)))))..((((.........))))((((((.((((.(((((.((((.((((((..((((...........))))..)))))).)))).))))).)))).)))))).((((..((.((....)).))..))))...

Structure
gguuugugcgggaucaccaccuuuaccuauggug      g    c     c    a      uc    uagc 
                                  ugugca ugcu cacuu agga gugcca  caug    u
                                  |||||| |||| ||||| |||| ||||||  ||||    a
                                  acgugu acgA GUGAG UUCU CACGGU  GUAU    a
----aaagucccggucgugacuacaacauggaca      a    U     U    C      UA    ccaa 


Annotation confidence Not enough data
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Genome context
chrX: 115652681-115652825 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from cfa-mir-507a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-507a

Accession MIMAT0034432
Description Canis familiaris cfa-miR-507a mature miRNA
Sequence 81 - UAUGAUUGGCACCUCUUUGAGUGUA - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545