miRBase entry: cfa-mir-8908c

Stem-loop cfa-mir-8908c

Accession

MI0028037

Description

Canis familiaris cfa-mir-8908c precursor miRNA

Gene family

MIPF0001890; mir-8908

Sequence

ugugugcagugcccugcucaggauggcgcugauuacauacucuaggaguGAUUAGCAUCUGCCUGGGCCGAGUgaugcucacu
.(((.(((..((.(.(((((((..((.(((((((((...........))))))))).))..))))))).).))..))).))).

Structure

u   u   gu  c u       au  c         auac 
 gug gca  gc c gcucagg  gg gcugauuac    u
 ||| |||  || | |||||||  || |||||||||    c
 cac cgu  UG G CGGGUCC  CU CGAUUAGug    u
u   u   ag  A C       GU  A         agga

Annotation confidence Not enough data

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Genome context

chrX: 114675824-114675906 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-8908c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-8908c

Accession	MIMAT0034433
Description	Canis familiaris cfa-miR-8908c mature miRNA
Sequence	50 - GAUUAGCAUCUGCCUGGGCCGAGU - 73
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545