miRBase entry: cfa-mir-8906

Stem-loop cfa-mir-8906


Accession
MI0028041
Description
Canis familiaris cfa-mir-8906 precursor miRNA


Sequence

ccgcauggugaggcgcgugugccucugggacccccUCCUCUGCAUUUGGCUGGGACGGCAuuuuuucaucccuggccgucccgggcauugucgggauggcguuaguggggcgggaggaaauacgcuuugucgcgu
.......((((.(.((((((.(((((.(..((((((((((((((..((.((((((((((...............)))))))))).)).)))..))).))....)).))))).)))))..))))))..).))))..

Structure
ccgcaug    g -c      -g     g ga    -  ----  -   --   UU  G          Auuuuu 
       guga g  gcgugu  ccucu g  cccc cU    CC UCU  GCA  UG CUGGGACGGC      u
       |||| |  ||||||  ||||| |  |||| ||    || |||  |||  || ||||||||||      c
       cgcu u  cgcaua  ggagg c  gggg ga    gg agg  ugu  ac ggcccugccg      a
-----ug    g uu      aa     g --    u  uugc  u   gc   -u  g          gucccu 


Annotation confidence Not enough data
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Genome context
chr16: 13916150-13916284 [+]

Database links

Mature cfa-miR-8906

Accession MIMAT0034434
Description Canis familiaris cfa-miR-8906 mature miRNA
Sequence 36 - UCCUCUGCAUUUGGCUGGGACGGCA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545