miRBase entry: eca-mir-8912

Stem-loop eca-mir-8912


Accession
MI0028047
Description
Equus caballus eca-mir-8912 precursor miRNA


Sequence

5 reads, 1 reads per million, 1 experiments
cuggggcucugaaaggggaagcaguagguaaauggcagagcugggauuugaacccgagcacacuggUUCCAGUCUGGGCUGUCAGUCuacacaaagccucugcaggggcagggacug
((..(.(((((..(((((.....((((.....(((((..(((.(((((.(((((.(......).))))).))))).))))))))..))))......))))).))))).)..))....

Structure
----  gg g     aa     -aagca    guaaa     ga   g     u     c ag 
    cu  g cucug  agggg      guag     uggca  gcu ggauu gaacc g  c
    ||  | |||||  |||||      ||||     |||||  ||| ||||| ||||| |   
    gg  c gggac  ucucc      cauC     ACUGU  CGG UCUGA CUUgg c  a
guca  ga g     -g     gaaaca    ---UG     --   G     C     u ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr20: 42190010-42190126 [+]

Database links

Mature eca-miR-8912

Accession MIMAT0034440
Description Equus caballus eca-miR-8912 mature miRNA
Sequence 67 - UUCCAGUCUGGGCUGUCAGUC - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545