Stem-loop eca-mir-8936

Accession

MI0028075

Description

Equus caballus eca-mir-8936 precursor miRNA

Sequence

7 reads, 1 reads per million, 1 experiments

guugccaaucagggaagcucucugaggcuuggaguccaggaauuguguugaaggucacuuguguaggccuggagugcccaCAUGACUGACCUUAGCCACUCGGACuccagguccuccacccuccagaggucaagcugauaugggc
....((((((((....((.((((((((((((((((((.((...((.(((((.(((((.((((((.((((....).))).)))))).)))))))))))))).)))))))))).))))........))))))....))))).)))..

Structure

guug   -     ggaa  u    --------    -          a  aau  u     a     c      a   - u 
    cca aucag    gc cucu        gagg cuuggagucc gg   ug guuga gguca uugugu ggc c g
    ||| |||||    || ||||        |||| |||||||||| ||   || ||||| ||||| |||||| ||| |  
    ggu uaguc    ug gaga        cucc ggaccuCAGG UC   AC CGAUU CCAGU AGUACa ccg g g
--cg   a     gaac  -    ccucccac    u          C  ---  -     -     C      c   u a 

Annotation confidence Not enough data

Genome context

NW_001867699.1: 164019-164163 [-]

Mature eca-miR-8936

• Accession: MIMAT0034465
• Description: Equus caballus eca-miR-8936 mature miRNA
• Sequence: 81 - CAUGACUGACCUUAGCCACUCGGAC - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545