miRBase entry: eca-mir-8924-2

Stem-loop eca-mir-8924-2


Accession
MI0028076
Description
Equus caballus eca-mir-8924-2 precursor miRNA
Gene family
MIPF0001957; mir-8924


Sequence

40 reads, 5 reads per million, 1 experiments
gccuggggccuggacgaggguuuuccccggguucuucggagcucugaggucaccgUGGGACUCGGGUGGAGGCUCUCCUGcggucaccuggggcc
((((.(((.(((.(.((((((((((((((((((((.(((.(((....)))..))).)))))))))).)))))))))).).)))...))).)))).

Structure
-    g   --c   g c          -          u   -a   c 
 gccu ggg   cug a gaggguuuuc cccggguucu cgg  gcu u
 |||| |||   ||| | |||||||||| |||||||||| |||  |||  
 cggg ucc   ggc U CUCUCGGAGG GGGCUCAGGG gcc  ugg g
c    g   acu   G C          U          U   ac   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_001868106.1: 98846-98940 [+]

Database links

Mature eca-miR-8924

Accession MIMAT0034452
Description Equus caballus eca-miR-8924 mature miRNA
Sequence 56 - UGGGACUCGGGUGGAGGCUCUCCUG - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545