miRBase entry: eca-mir-8938

Stem-loop eca-mir-8938


Accession
MI0028078
Description
Equus caballus eca-mir-8938 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
accuucaccuucguuggcgguuccuUUGCGUUCUGGCGGCUGCUGCUUCCugcggguugcgggccccaagggggcgcugcugucacccaggguggggggauggcgggcgcggguu
......((((.((((.((.((((((((((.((.(((((((.((.(((((((..(((((...)))))..))))))))).)))))))...)).)))))))))).)).)))).)))).

Structure
accuuc    u    g  g          G  --C       U  U       gc     g 
      accu cguu gc guuccuUUGC UU   UGGCGGC GC GCUUCCu  ggguu  
      |||| |||| || |||||||||| ||   ||||||| || |||||||  ||||| c
      uggg gcgg cg uaggggggug ga   acugucg cg cggggga  cccgg  
-----u    c    g  g          g  ccc       u  -       ac     g 


Annotation confidence Not enough data
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Genome context
NW_001876463.1: 156417-156531 [-]

Database links

Mature eca-miR-8938

Accession MIMAT0034467
Description Equus caballus eca-miR-8938 mature miRNA
Sequence 26 - UUGCGUUCUGGCGGCUGCUGCUUCC - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545