miRBase entry: eca-mir-8940-1

Stem-loop eca-mir-8940-1


Accession
MI0028082
Description
Equus caballus eca-mir-8940-1 precursor miRNA
Gene family
MIPF0002072; mir-8940


Sequence

3 reads, 0 reads per million, 1 experiments
ggcugagccaauggcaaccucugucaacuugugucugcuccuggcaucuggccgccuggacuaUUUGCCGGAGCUGGAUCAGCUGGggucugcugagggcgucagacagca
..(((((((...(((((((((.((.....((.(((((((((.((((..(((((....)).)))..))))))))).)))))))).))))).))))...))).))))......

Structure
----gg    -   aau    -     u  caacu  u    -     u    uc   -  g 
      cuga gcc   ggca accuc gu     ug gucu gcucc ggca  ugg cc c
      |||| |||   |||| ||||| ||     || |||| ||||| ||||  ||| ||  
      gacu cgg   ucgu uggGG CG     AC UAGG CGAGG CCGU  auc gg c
acgaca    g   gag    c     U  -----  -    U     -    UU   a  u 


Annotation confidence Not enough data
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Genome context
chr24: 386776-386886 [-]

Database links

Mature eca-miR-8940

Accession MIMAT0034469
Description Equus caballus eca-miR-8940 mature miRNA
Sequence 64 - UUUGCCGGAGCUGGAUCAGCUGG - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545