miRBase entry: eca-mir-8941-1

Stem-loop eca-mir-8941-1


Accession
MI0028085
Description
Equus caballus eca-mir-8941-1 precursor miRNA
Gene family
MIPF0001932; mir-8941


Sequence

1932 reads, 273 reads per million, 1 experiments
cuggagccugaguagcugcagagggaggugaugacacugcagaggacucugcuggggaaggcuggcagcacagucUCUGAGAGCCUCUGCAUCAUgccugccuggagggcgcgcauccugcaggccucagugaca
(((.(((.......))).)))(((.((((.((((...((((((((.((((.(...(((.(((((......))))))))))))))))))))))))))))).))).((((.(..(((...))).).)))).......

Structure
-----------cuggagccugaguagcugcag   g    g    cac        a    g ugg   a     gc 
                                agg aggu auga   ugcagagg cucu c   gga ggcug  a
                                ||| |||| ||||   |||||||| |||| |   ||| |||||   
                                ucc uccg UACU   ACGUCUCC GAGA G   UCU cugac  g
acagugacuccggacguccuacgcgcgggagg   g    -    ---        -    - ---   -     ac 


Annotation confidence Not enough data
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Genome context
NW_001869382.1: 19013-19147 [-]

Database links

Mature eca-miR-8941

Accession MIMAT0034470
Description Equus caballus eca-miR-8941 mature miRNA
Sequence 76 - UCUGAGAGCCUCUGCAUCAU - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545