miRBase entry: eca-mir-8953

Stem-loop eca-mir-8953


Accession
MI0028100
Description
Equus caballus eca-mir-8953 precursor miRNA


Sequence

8 reads, 1 reads per million, 1 experiments
aaagggaaguggugaauaacugcuacuaagugccuggucuAGGGCUGGAAGGAUAUAUACAggcucaacacugccccaguaugucuucuuuccagcccccaugucuccuguggaagauuauauuaugcucuucccag
...((((((.(((((((((((.((((.....((.(((....((((((((((((.((((((.(((........)))...))))))..))))))))))))))).)).....)))).)).)))).)))).).))))))..

Structure
aaa      u -    -    -  g    uaagu  c   ucuA            -U      --A   uca 
   gggaag g guga auaa cu cuac     gc ugg    GGGCUGGAAGGA  AUAUAC   ggc   a
   |||||| | |||| |||| || ||||     || |||    ||||||||||||  ||||||   |||    
   cccuuc c uauu uauu ga ggug     ug acc    cccgaccuuucu  uguaug   ccg   c
-ga      u g    a    a  a    uccuc  u   ----            uc      acc   uca 


Annotation confidence Not enough data
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Genome context
chr23: 28713907-28714043 [-]

Database links

Mature eca-miR-8953

Accession MIMAT0034482
Description Equus caballus eca-miR-8953 mature miRNA
Sequence 41 - AGGGCUGGAAGGAUAUAUACA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545