miRBase entry: eca-mir-8957

Stem-loop eca-mir-8957


Accession
MI0028110
Description
Equus caballus eca-mir-8957 precursor miRNA


Sequence

90 reads, 14 reads per million, 1 experiments
aagcccagaacaagggucacuggauguggguucaguuugccuugugaacuuagugguuguucuggggcagcucucgucacUGCCUUCUCUGAGCCACCCUAUUCAuccaggagaacucaggaccugccagcccgagccuucucac
..((((.......))))..(((((((((((...(((((((...)))))))..((((((.....(((((((.........))))))).....))))))))))..)))))))((((((((.((.(......))).)))..)))))..

Structure
----------------aagcccagaacaaggguca       --    uucaguuugccuugugaacuua      guucu       cuc 
                                   cuggaug  uggg                      gugguu     ggggcag   u
                                   |||||||  ||||                      ||||||     |||||||   c
                                   gaccuAC  AUCC                      CACCGA     UUCCGUc   g
cacucuuccgagcccgaccguccaggacucaagag       UU    ----------------------      GUCUC       acu 


Annotation confidence Not enough data
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Genome context
chr21: 2287480-2287624 [+]

Database links

Mature eca-miR-8957

Accession MIMAT0034491
Description Equus caballus eca-miR-8957 mature miRNA
Sequence 81 - UGCCUUCUCUGAGCCACCCUAUUCA - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545