miRBase entry: eca-mir-8959

Stem-loop eca-mir-8959


Accession
MI0028112
Description
Equus caballus eca-mir-8959 precursor miRNA


Sequence

12 reads, 2 reads per million, 1 experiments
cgagagacuugaggacgugaUUCGAAUCCUGAGGUCGCCUCCCCaugauguggggcaggugagccgaggaguagaaagaaagguuucuuggggucucaagguc
...(((((((.(((((.(..(((...((((..(.((((((((((((...)))))).)))))).)..))))...)))....).)..)))).)))))))......

Structure
---cga       g    -- g --ga   GAA    GA G      -      g 
      gagacuu agga  c u    UUC   UCCU  G UCGCCU CCCCau  
      ||||||| ||||  | |    |||   ||||  | |||||| |||||| a
      cucuggg uucu  g a    aag   agga  c agugga ggggug  
cuggaa       g    uu g aaga   aug    gc g      c      u 


Annotation confidence Not enough data
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Genome context
chr21: 1326010-1326112 [-]

Database links

Mature eca-miR-8959

Accession MIMAT0034493
Description Equus caballus eca-miR-8959 mature miRNA
Sequence 21 - UUCGAAUCCUGAGGUCGCCUCCCC - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545