miRBase entry: eca-mir-8968

Stem-loop eca-mir-8968


Accession
MI0028122
Description
Equus caballus eca-mir-8968 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
gcuggggcuucgggacccuccucaucccaggaugaugaaccugugccagcugugugacccuggggaaguuacucagccucUCUGGGUCUUAGGAUGACGGCACUCaccuccuccaugguugugaggagaguucugcucuccuugg
...((((...((((((.((((((((.((((((.(((((....(((((..(..((.(((((.(((((.(((....))).)))))))))).))....)..))))))))..)).))).)))..)))))))).))))))..))))....

Structure
-gcu    cuu      c        -c   -   u  --   accu     ag --ug  u     u     a   a 
    gggg   cgggac cuccucau  cca gga ga  uga    gugcc  c    ug gaccc gggga guu c
    ||||   |||||| ||||||||  ||| ||| ||  |||    |||||  |    || ||||| ||||| |||  
    ccuc   gucuug gaggagug  ggu ccu cu  aCU    CACGG  G    AU CUGGG UCUcu cga u
gguu    -uc      a        uu   a   c  cc   ----     CA UAGG  U     -     c   c 


Annotation confidence Not enough data
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Genome context
chr22: 23667980-23668124 [+]

Database links

Mature eca-miR-8968

Accession MIMAT0034503
Description Equus caballus eca-miR-8968 mature miRNA
Sequence 81 - UCUGGGUCUUAGGAUGACGGCACUC - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545