miRBase entry: eca-mir-8969

Stem-loop eca-mir-8969


Accession
MI0028125
Description
Equus caballus eca-mir-8969 precursor miRNA


Sequence

10 reads, 0 reads per million, 1 experiments
acagcagacauaggaaaggggcacaggcuggccuccugcaaucagcagaggugguucagugggagaagccauccccUGGGCUUUCUGUGCUGAUGGGgucaugcagcuuguuuguguaauuacugaaaaggcaauuu
.(((...(((((((.(((..(((.....(((((((.....(((((((.(((.(((((((.((((.......))))))))))).))).)))))))))))))))))..))).))))))).....)))............

Structure
-----------a   --cag       a   gg   caggc       cugca       g   u       u    ga 
            cag     acauagg aag  gca     uggccuc     aucagca agg gguucag ggga  a
            |||     ||||||| |||  |||     |||||||     ||||||| ||| ||||||| ||||  g
            guc     uguguuu uuc  cgu     acugGGG     UAGUCGU UCU UCGGGUc cccu  c
uuuaacggaaaa   auuaa       g   ga   -----       -----       G   U       -    ac 


Annotation confidence Not enough data
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Genome context
chr5: 22925137-22925273 [-]

Database links

Mature eca-miR-8969

Accession MIMAT0034506
Description Equus caballus eca-miR-8969 mature miRNA
Sequence 77 - UGGGCUUUCUGUGCUGAUGGG - 97
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545