miRBase entry: eca-mir-8988

Stem-loop eca-mir-8988


Accession
MI0028144
Description
Equus caballus eca-mir-8988 precursor miRNA


Sequence

7 reads, 1 reads per million, 1 experiments
cucccugaaaugucccucagccucuucccuuuuccccagggccguguucaagccggcuggggagguaggggccaugcccuUAGCCCCCAGCUUGUUUGUACUGCAgugaggggaagaggagaggaggugaacggagauuucuuau
......(((((.(((....((((((((((((((((((...((.((((.(((((.((((((((.(.(((((((...))))))).))))))))).))))).)).)).))..)))))))))).))))))))....))).)))))....

Structure
cucccu     g   cuca        -          agg  c  -  u     c        a g       c 
      gaaau ucc    gccucuuc ccuuuucccc   gc gu gu caagc ggcugggg g uaggggc  
      ||||| |||    |||||||| ||||||||||   || || || ||||| |||||||| | ||||||| a
      cuuua agg    uggaggag ggagaagggg   ug CG CA GUUUG UCGACCCC C AUucccg  
--uauu     g   caag        a          -ag  A  U  U     U        - G       u 


Annotation confidence Not enough data
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Genome context
chr7: 27014139-27014283 [-]

Database links

Mature eca-miR-8988

Accession MIMAT0034525
Description Equus caballus eca-miR-8988 mature miRNA
Sequence 81 - UAGCCCCCAGCUUGUUUGUACUGCA - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545