Stem-loop eca-mir-8997

Accession

MI0028155

Description

Equus caballus eca-mir-8997 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

gugcucgcucugucccaguguuggccucaggccccucuggcugccuuggucugccgucugcuaagcucucagagugaUUGCGGACAAGGGAAGCCCCAGggacccuaaagcccccuccugccaccaugcucuccgccgc
(((...((...((..(((....(((...(((.((((..((((.((((.((((((.(((......((((...))))))).)))))).)))).))))..))))..)))...))).....)))..))...))....)))...

Structure

---   -cuc  ucu  cc   -uguu   cuc   -c    cu    g    g      c   ugcuaa    u 
   gug    gc   gu  cag     ggc   agg  cccu  ggcu ccuu gucugc guc      gcuc  
   |||    ||   ||  |||     |||   |||  ||||  |||| |||| |||||| |||      |||| c
   cgc    cg   ca  guc     ccg   ucc  ggGA  CCGA GGGA CAGGCG Uag      ugag  
cgc   cucu  uac  cc   cuccc   aaa   ca    CC    A    A      U   ------    a 

Annotation confidence Not enough data

Genome context

chr7: 44761714-44761852 [+]

Mature eca-miR-8997

• Accession: MIMAT0034536
• Description: Equus caballus eca-miR-8997 mature miRNA
• Sequence: 78 - UUGCGGACAAGGGAAGCCCCAG - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545