miRBase entry: eca-mir-9000

Stem-loop eca-mir-9000


Accession
MI0028159
Description
Equus caballus eca-mir-9000 precursor miRNA


Sequence

8 reads, 0 reads per million, 1 experiments
ugauuacgaguggaaagacuAGGGCUGACCCAGUGGCGCAGUGguuaagugcgcacauuccgcuucucgggagcccgggguucgcugguucggauccccag
........(((......))).(((((..(((((.((((.((((((.......)).)))).)))).)).))))))))((((((((......))))))))...

Structure
----ugauuacgaguggaaagacuA     GA   -  U    C    -  ua 
                         GGGCU  CCC AG GGCG AGUG gu  a
                         |||||  ||| || |||| |||| ||  g
                         cccga  ggg uc ucgc uuac cg  u
gaccccuaggcuuggucgcuugggg     --   c  u    c    a  cg 


Annotation confidence Not enough data
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Genome context
chr7: 27935041-27935141 [-]

Database links

Mature eca-miR-9000

Accession MIMAT0034540
Description Equus caballus eca-miR-9000 mature miRNA
Sequence 21 - AGGGCUGACCCAGUGGCGCAGUG - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545