Stem-loop eca-mir-9004

Accession

MI0028164

Description

Equus caballus eca-mir-9004 precursor miRNA

Sequence

319 reads, 9 reads per million, 1 experiments

uuauuuauuuauuuagugaggaagauuggcACAGUGUUAGCUCAGUGACAGUuuugugaggaagauugucacugagcuaacacugugccagucuuccucuauuuuguaugugggaugcc
....((((.(((..(((((((((((((((((((((((((((((((((((((((((......)))))))))))))))))))))))))))))))))))))).)))..))).))))......

Structure

--uuau    u   uu   -                                      gu 
      uuau uau  agu gaggaagauuggcACAGUGUUAGCUCAGUGACAGUuuu  g
      |||| |||  ||| ||||||||||||||||||||||||||||||||||||||   
      ggug aug  uua cuccuucugaccgugucacaaucgagucacuguuagaa  a
ccguag    u   uu   u                                      gg 

Annotation confidence Not enough data

Genome context

chr8: 33967964-33968082 [-]

Mature eca-miR-9004

• Accession: MIMAT0034544
• Description: Equus caballus eca-miR-9004 mature miRNA
• Sequence: 31 - ACAGUGUUAGCUCAGUGACAGU - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545