miRBase entry: eca-mir-9016

Stem-loop eca-mir-9016


Accession
MI0028178
Description
Equus caballus eca-mir-9016 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
aacaaggcagagaacaggccagccuggggccuugaggagcUAGUUAGAGUGCCUGUCAAGUGUGGgucuagggggagcugcugggccucuaagugucuucucccuagagccuagaggcgcugguguccugugcaugccacggggc
.....((((....((((((((((((.((((((.((((((.((.((((((.(((((......((((.(((....))).))))))))))))))).)).))))))...)).))))...)).)))))...)))))...)))).......

Structure
--aacaa    gaga     ---     -  --g    -  --u      c  G      U     UCAAGU    g   a 
       ggca    acagg   ccagc cu   gggc cu   gaggag UA UUAGAG GCCUG      GUGG ucu g
       ||||    |||||   ||||| ||   |||| ||   |||||| || |||||| |||||      |||| |||  
       ccgu    ugucc   ggucg gg   uccg ga   cucuuc gu aaucuc cgggu      cguc agg g
cggggca    -acg     ugu     c  aga    a  ucc      u  g      -     ------    g   g 


Annotation confidence Not enough data
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Genome context
chr9: 82220055-82220199 [+]

Database links

Mature eca-miR-9016

Accession MIMAT0034557
Description Equus caballus eca-miR-9016 mature miRNA
Sequence 41 - UAGUUAGAGUGCCUGUCAAGUGUGG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545