miRBase entry: eca-mir-9017

Stem-loop eca-mir-9017


Accession
MI0028180
Description
Equus caballus eca-mir-9017 precursor miRNA


Sequence

19 reads, 3 reads per million, 1 experiments
gggcagguagcugcgagggcagagguagggagaagggaggccacauacaagucuggagacacugggagggggcuggguggCAGGUGUGUUGGGAUUGUCUGCUCUucuuggguuuccugacucggaggucugaugcccacagucg
..((((....))))..(((((..((....(((..((((((((.....((((...(.(((((....((.(.(.(((.....))).).).)).....))))).)....))))))))))))..)))......))..))))).......

Structure
gggcagguagcugcga     ga  --uagg   aa        acaua    -ucu g     -cugg  g g g   g 
                gggca  gg      gag  gggaggcc     caag    g agaca     ga g g cug g
                |||||  ||      |||  ||||||||     ||||    | |||||     || | | ||| u
                cccgu  uc      cuc  uccuuugg     guuc    C UCUGU     UU U U GAC g
---------gcugaca     ag  uggagg   ag        -----    uUCU G     UAGGG  G G G   g 


Annotation confidence Not enough data
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Genome context
chr28: 37868767-37868911 [-]

Database links

Mature eca-miR-9017

Accession MIMAT0034558
Description Equus caballus eca-miR-9017 mature miRNA
Sequence 81 - CAGGUGUGUUGGGAUUGUCUGCUCU - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545