Stem-loop eca-mir-9030

Accession

MI0028194

Description

Equus caballus eca-mir-9030 precursor miRNA

Sequence

5 reads, 1 reads per million, 1 experiments

agcuaaacgauguaguuacuauuaucccucuuuuacuggaAAACAGGGUUGAGUAACUUCCcaagcuuucagaguuaaagggagagccucaauuuaaacccagguuuuccagcccgagagccaugugguaacuaaua
............((((((((((.....(((((...(((((((((.((((((((....(((((.(((((...)))))...)))))...))))......))))..)))))))))...)))))....))))))))))...

Structure

agcuaaacgaug          uaucc     uua         -A    ------    UAAC     --a     u 
            uaguuacuau     cucuu   cuggaAAAC  GGGU      UGAG    UUCCc   agcuu  
            ||||||||||     |||||   |||||||||  ||||      ||||    |||||   ||||| c
            aucaauggug     gagag   gaccuuuug  ccca      acuc    gaggg   uugag  
---------aua          -uacc     ccc         ga    aauuua    -cga     aaa     a 

Annotation confidence Not enough data

Genome context

chr26: 2468397-2468533 [-]

Mature eca-miR-9030

• Accession: MIMAT0034572
• Description: Equus caballus eca-miR-9030 mature miRNA
• Sequence: 41 - AAACAGGGUUGAGUAACUUCC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545