miRBase entry: eca-mir-9047

Stem-loop eca-mir-9047


Accession
MI0028215
Description
Equus caballus eca-mir-9047 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
cgcaaucccgccuucuuuccuagcacuuccUGUUCCCGGCUGACCCUGGCUAGGggcccagggccgaagagugaccguggccggagugacccggggcggcugcgcggacugggcugggccgug
(((...(((((((....(((..(((....((((.(((((.(.((.(((((((((((((...)))).........)).))))))).)).).))))))))).)))..)))..)))).)))..)))

Structure
   aau   -    ucuu   ua   cuuc    U     C G  C       -  ---------    c 
cgc   ccc gccu    ucc  gca    cUGU CCCGG U AC CUGGCUA GG         ggcc  
|||   ||| ||||    |||  |||    |||| ||||| | || ||||||| ||         |||| a
gug   ggg cggg    agg  cgu    ggcg gggcc a ug ggccggu cc         ccgg  
   -cc   u    --uc   cg   ---c    -     c g  a       g  agugagaag    g 


Annotation confidence Not enough data
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Genome context
chr1: 162054092-162054214 [+]

Database links

Mature eca-miR-9047

Accession MIMAT0034591
Description Equus caballus eca-miR-9047 mature miRNA
Sequence 31 - UGUUCCCGGCUGACCCUGGCUAGG - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545