miRBase entry: eca-mir-9051

Stem-loop eca-mir-9051


Accession
MI0028221
Description
Equus caballus eca-mir-9051 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
auagugaaaacucaaaccuuUAUUUUGUAGCAGACUUCAGUUCUCgcaggcuaagggggcagaggucuuaaagcaaagguuaccugagugaagggagaguucccc
........(((((...(((((((((.((((((((((((.((((((.........)))))).)))))))..........)))))..)))))))))..)))))....

Structure
auagugaa     aaa         -U     ----------       A      gca 
        aacuc   ccuuUAUUU  GUAGC          AGACUUC GUUCUC   g
        |||||   |||||||||  |||||          ||||||| ||||||   g
        uugag   ggaagugag  cauug          ucuggag cggggg   c
----cccc     -ag         uc     gaaacgaaau       a      aau 


Annotation confidence Not enough data
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Genome context
chr1: 108539637-108539741 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-9051
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-9051

Accession MIMAT0034595
Description Equus caballus eca-miR-9051 mature miRNA
Sequence 21 - UAUUUUGUAGCAGACUUCAGUUCUC - 45
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545