miRBase entry: eca-mir-9066

Stem-loop eca-mir-9066


Accession
MI0028239
Description
Equus caballus eca-mir-9066 precursor miRNA


Sequence

9 reads, 1 reads per million, 1 experiments
agaccagggaccucagcuccuccguggaugagaaggcccaUAGACAACAGUCCUGAUCCUGGGCAgccggaaugacagggcuugccagugaaggaacugugucuuccuccuugaagacggaagugcaauaaugacccugcuucuc
(((.(((((...(((((.(.(((((...((((.(((.....(((((.(((((((..((((((..((((..........))))..)))).))))).))))))))).))).))))...))))).).)).....))))))))..))).

Structure
-   -c     acc   -----  u c     gga    a   cccaU     A    -   GA  -    GC    ggaa 
 aga  caggg   uca     gc c uccgu   ugag agg     AGACA CAGU CCU  UC CUGG  Agcc    u
 |||  |||||   |||     || | |||||   |||| |||     ||||| |||| |||  || ||||  ||||     
 ucu  guccc   agu     cg g aggca   guuc ucc     ucugu guca gga  ag gacc  ucgg    g
c   uc     ---   aauaa  u a     gaa    c   ----u     -    a   --  u    gu    gaca 


Annotation confidence Not enough data
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Genome context
chr2: 40245681-40245825 [-]

Database links

Mature eca-miR-9066

Accession MIMAT0034611
Description Equus caballus eca-miR-9066 mature miRNA
Sequence 41 - UAGACAACAGUCCUGAUCCUGGGCA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545