Stem-loop eca-mir-9072

Accession

MI0028245

Description

Equus caballus eca-mir-9072 precursor miRNA

Sequence

3 reads, 0 reads per million, 1 experiments

uuuggaccagccgcggcacgcuuggcggggaggguggugcuuacuaaaaugcagauuacugggcgcuaccccccaggUAAAGCCUGGAAAUCUGCAGCUuagccaguuccacggaugauucccgucagguggccccagg
..........((..(((.(((((((((((((..((((.(((..((((..((((((((.((((((..((((.....))))..)))))).))))))))..))))..))).))))......))))))))))))))))...))

Structure

uuuggaccag  -gc   a             ----gg    u   ua    aa        a      gc    c 
          cc   ggc cgcuuggcgggga      gugg gcu  cuaa  ugcagauu cugggc  uacc c
          ||   ||| |||||||||||||      |||| |||  ||||  |||||||| ||||||  |||| c
          gg   ccg guggacugcccuu      cacc uga  gauU  ACGUCUAA GGUCCG  AUgg c
----------  acc   -             aguagg    u   cc    CG        A      AA    a 

Annotation confidence Not enough data

Genome context

chr3: 1799684-1799822 [-]

Mature eca-miR-9072

• Accession: MIMAT0034617
• Description: Equus caballus eca-miR-9072 mature miRNA
• Sequence: 78 - UAAAGCCUGGAAAUCUGCAGCU - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545