miRBase entry: eca-mir-9073

Stem-loop eca-mir-9073


Accession
MI0028246
Description
Equus caballus eca-mir-9073 precursor miRNA


Sequence

9 reads, 1 reads per million, 1 experiments
ggaggaggggccugagcuuccucuuugcccucaugagcucugagccuggcagugggggaugguccaaacaaguccgugcaUGAGUGAAUGAGUCCCCACACGGAGgcugugcagcaugaugguuagacgugcagguucuggccuc
......((((((.(((((((((((..(((.(((((.((....(((((....(((((((((.((.((..((.((....)).))..)).))..)))))).)))..)))))..))..))))).))).))).).).)))))).))))))

Structure
ggagga      u      - - -   uu   c     -a  ucug     ggca   -      -g  c  aa  a  c 
      ggggcc gagcuu c c ucu  gcc ucaug  gc    agccu    gug ggggau  gu ca  ca gu c
      |||||| |||||| | | |||  ||| |||||  ||    |||||    ||| ||||||  || ||  || ||  
      cuccgg cuugga g g aga  ugg aguac  cg    ucgGA    CAC CCCCUG  UA GU  GU cg g
------      u      c u c   -u   u     ga  --ug     --GG   A      AG  A  GA  a  u 


Annotation confidence Not enough data
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Genome context
chr3: 31596382-31596526 [+]

Database links

Mature eca-miR-9073

Accession MIMAT0034618
Description Equus caballus eca-miR-9073 mature miRNA
Sequence 81 - UGAGUGAAUGAGUCCCCACACGGAG - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545