miRBase entry: eca-mir-9083

Stem-loop eca-mir-9083


Accession
MI0028256
Description
Equus caballus eca-mir-9083 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
acgcuuucccagucggggguccuugcgcgccugagguccgGGCCACGCGGUGUGCUAUCGUCGGCgcugcagagccagcguccaggcuucgccauaucucguucggggacacuuuggggcuggggaccggucccgugccaaggga
......((((.((((((((((((((.((.((.(((((((.....(((.((((((.....((((((((((......))))).)).))).....)))))).)))....)))).))).)).))))))))))...)))).))...))))

Structure
acgcuu    --a  -    ---        c  g  u   -    gGGCC   C      CUAUC   -  -     ca 
      uccc   gu cggg   gguccuug gc cc gag gucc     ACG GGUGUG     GUC GG Cgcug  g
      ||||   || ||||   |||||||| || || ||| ||||     ||| ||||||     ||| || |||||   
      aggg   cg gccc   ccaggggu cg gg uuc cagg     ugc cuauac     cgg cc gcgac  a
------    aac  u    ugg        -  g  u   a    -ggcu   u      cgcuu   a  u     cg 


Annotation confidence Not enough data
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Genome context
chr4: 102685076-102685220 [+]

Database links

Mature eca-miR-9083

Accession MIMAT0034628
Description Equus caballus eca-miR-9083 mature miRNA
Sequence 41 - GGCCACGCGGUGUGCUAUCGUCGGC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545