miRBase entry: eca-mir-9084

Stem-loop eca-mir-9084


Accession
MI0028257
Description
Equus caballus eca-mir-9084 precursor miRNA


Sequence

cccgccuagggcuucuccaaucucuuuucugacuuUGUUUUCUCAAAGACUGAUCCUuggggaucccgucagugcuuggagaaacgaagagggugggggaaagagggaagaagauaggcguggcuuccu
((((((((...(((((((..((((((.(((..((((((((.(((.(((((((((....(((...))))))))).))).))))))))))).))).))))))..).))))))....)))))).))......

Structure
------  -      -ggg      - aa      u   ga        U   A   -      CCUu   g 
      cc cgccua    cuucuc c  ucucuu ucu  cuuUGUUU CUC AAG ACUGAU    ggg  
      || ||||||    |||||| |  |||||| |||  |||||||| ||| ||| ||||||    ||| a
      gg gcggau    gaaggg g  aggggg ggg  gaagcaaa gag uuc ugacug    ccc  
uccuuc  u      agaa      a aa      u   -a        -   g   g      ----   u 


Annotation confidence Not enough data
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Genome context
chr4: 83795551-83795679 [+]

Database links

Mature eca-miR-9084

Accession MIMAT0034629
Description Equus caballus eca-miR-9084 mature miRNA
Sequence 36 - UGUUUUCUCAAAGACUGAUCCU - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545