miRBase entry: eca-mir-9091

Stem-loop eca-mir-9091


Accession
MI0028264
Description
Equus caballus eca-mir-9091 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
aauugcaugccugagagccagcugcucaugggagacagaacuguaacuucagcgccuguguccugccucccagUAUAUGGACGGAGUCUGAAACAGugcgcucccagccccgcucucugaugcugggaugg
.(((.((.((..((((((.....(((...(((((.....(((((...(((((...((.((((((((......)))...))))).)).))))))))))...))))))))...))))))....)))).)))..

Structure
-a   g  u  --cu      cagcu   cau     acaga     aac     cgc  g     ---   cu 
  auu ca gc    gagagc     gcu   gggag     acugu   uucag   cu ugucc   ugc  c
  ||| || ||    ||||||     |||   |||||     |||||   |||||   || |||||   |||   
  uag gu cg    cucucg     cga   cccuc     uGACA   AAGUC   GA GCAGG   AUg  c
gg   g  -  uagu      --ccc   ---     --gcg     ---     --U  G     UAU   ac 


Annotation confidence Not enough data
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Genome context
chr10: 8611271-8611401 [-]

Database links

Mature eca-miR-9091

Accession MIMAT0034636
Description Equus caballus eca-miR-9091 mature miRNA
Sequence 74 - UAUAUGGACGGAGUCUGAAACAG - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545