miRBase entry: eca-mir-9096

Stem-loop eca-mir-9096


Accession
MI0028272
Description
Equus caballus eca-mir-9096 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
aagggcacgagguugaaggaccuagggagcugcacagcggggccagguggcagggaaagagucgcagcugugccccugccUCGUCUUGUCGCCCUGGAACCUCUCaugugcaaaccgaggaccuuguaggugaccucacgggccc
..((((..(((((((((((.(((.((....(((((((.(((((((((((((((((...(((..((((........))))))).)))))))).)))))..)))).).))))))..)).))).)))).....)))))))....))))

Structure
aa    --ac       -----    a   a  gagc      - c    --     -        aaa   uc    cug 
  gggc    gagguug     aagg ccu gg    ugcaca g gggg  ccagg uggcaggg   gag  gcag   u
  ||||    |||||||     |||| ||| ||    |||||| | ||||  ||||| ||||||||   |||  ||||    
  cccg    cuccagu     uucc gga cc    acgugu C CUCC  GGUCC GCUGUUCU   CUc  cguc   g
--    ggca       ggaug    a   g  --aa      a U    AA     C        --G   --    ccc 


Annotation confidence Not enough data
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Genome context
chr11: 50837068-50837212 [+]

Database links

Mature eca-miR-9096

Accession MIMAT0034642
Description Equus caballus eca-miR-9096 mature miRNA
Sequence 81 - UCGUCUUGUCGCCCUGGAACCUCUC - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545