miRBase entry: eca-mir-9101

Stem-loop eca-mir-9101


Accession
MI0028278
Description
Equus caballus eca-mir-9101 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
uccacgugugcaagcucggggaggggacggggcgcagaaggcgugacaaagacagacuUUGUGUCUGAGUGUACGCCUUGCuccagcccggagcagccaac
......((.((..((((.(((.((((.(((((((((..((((...((((((.....))))))))))...))..)))))))))))..))).)))).))))..

Structure
uccacg  u  aa    g   -a    a       --  -ga    gug      a 
      ug gc  gcuc ggg  gggg cggggcg  ca   aggc   acaaag c
      || ||  |||| |||  |||| |||||||  ||   ||||   |||||| a
      ac cg  cgag ccc  ccuC GUUCCGC  GU   UCUG   UGUUuc g
----ca  -  -a    g   ga    -       AU  GAG    ---      a 


Annotation confidence Not enough data
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Genome context
chr11: 7397292-7397392 [-]

Database links

Mature eca-miR-9101

Accession MIMAT0034648
Description Equus caballus eca-miR-9101 mature miRNA
Sequence 59 - UUGUGUCUGAGUGUACGCCUUGC - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545