miRBase entry: eca-mir-9104

Stem-loop eca-mir-9104


Accession
MI0028281
Description
Equus caballus eca-mir-9104 precursor miRNA


Sequence

ggaggguagagagcuggugagggcagggaguggcugggcucagcagggcggagggucaggaggugagcuuggcucugCUGACCUGAGGCCUCUGCUGCAggcccuacuucaccuacuggcugacuuuuguccacaucau
(((.((.((..(((((((..(((...(((((((..((.(((((((((((...(((((((.((((.......)).)).)))))))...))).)))))).)).))))))))).))))))))))..)).)).))).......

Structure
-------   g  u  ag       ga   cag       cu  g  -      -   gga       g  -  ga 
       gga gg ag  agcuggu  ggg   ggagugg  gg cu cagcag ggc   gggucag ag gu  g
       ||| || ||  |||||||  |||   |||||||  || || |||||| |||   ||||||| || ||  c
       ccu uu uc  ucgguca  ucc   cuucauc  cc gA GUCGUC CCG   UCCAGUC uc cg  u
uacuaca   g  u  ag       --   --a       --  g  C      U   GAG       g  u  gu 


Annotation confidence Not enough data
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Genome context
chr11: 5692449-5692587 [+]

Database links

Mature eca-miR-9104

Accession MIMAT0034651
Description Equus caballus eca-miR-9104 mature miRNA
Sequence 78 - CUGACCUGAGGCCUCUGCUGCA - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545