miRBase entry: eca-mir-9111

Stem-loop eca-mir-9111


Accession
MI0028290
Description
Equus caballus eca-mir-9111 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
guauaugcauuuccauguugccagcaguccuuuccUAGGUGCAUCCGUGGCCCCAGUCCccggcccagcuugcugucccauacucagggcucggucguggaauccgugcgccuuacacgaggguggcaccugg
............(((.((.((((....(((((....((((((((....((......(((.(((((.((((..(((.........))))))).))))).)))..)))))))))).....))))))))))).)))

Structure
guauaugcauuu   u  u    gcag     -uccU        CCGU  CCCCAG   c     c    ug   ucc 
            cca gu gcca    uccuu     AGGUGCAU    GG      UCC cggcc agcu  cug   c
            ||| || ||||    |||||     ||||||||    ||      ||| ||||| ||||  |||   a
            ggu ca cggu    gggag     uccgcgug    cc      agg gcugg ucgg  gac   u
------------   c  -    ----     cacau        ----  ----ua   u     c    --   uca 


Annotation confidence Not enough data
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Genome context
chr12: 2512584-2512716 [+]

Database links

Mature eca-miR-9111

Accession MIMAT0034660
Description Equus caballus eca-miR-9111 mature miRNA
Sequence 36 - UAGGUGCAUCCGUGGCCCCAGUCC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545