Stem-loop eca-mir-9117

Accession

MI0028297

Description

Equus caballus eca-mir-9117 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

cugagacaccgccuggcuccgugacuccugggcagguggugucauccugguuuccuugucuuuaaaaUAGGGAUCAUGCCAUCUGCUGUauauaccgccaggcuguucaggaauuuuuu
(((((.((..(((((((...(((.......((((((((((((.(((((.((((...........)))).))))).)))))))))))).....))).)))))))))))))).........

Structure

---------     a  cc       ucc   acuccug            c     g    ccuu 
         cugag ca  gccuggc   gug       ggcagguggugu auccu guuu    g
         ||||| ||  |||||||   |||       |||||||||||| ||||| ||||    u
         gacuu gu  cggaccg   cau       UCGUCUACCGUA UAGGG Uaaa    c
uuuuuuaag     -  --       --c   --auaUG            C     A    auuu 

Annotation confidence Not enough data

Genome context

chr12: 26267169-26267287 [+]

Mature eca-miR-9117

• Accession: MIMAT0034666
• Description: Equus caballus eca-miR-9117 mature miRNA
• Sequence: 68 - UAGGGAUCAUGCCAUCUGCUGU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545