miRBase entry: eca-mir-9127

Stem-loop eca-mir-9127


Accession
MI0028309
Description
Equus caballus eca-mir-9127 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
ggaaaccaccgccuccagcggccggccagcucuccUGCUUCUCUUGCGCUCUUGGGCUCggcccuggcgagggucagagggucugaagacgcgcguggugacagugggacacgcaucuguugggaaggcacuc
((......))(((((((((((...((......(((((((((.(((((((((((((((((((((((....))))))...)))))).)))).))))).)).)).)))))))...))..)))))))..))))....

Structure
ggaaaccacc    --       ccg  cagcuc       -  U  -     -    -      ---      g 
          gccu  ccagcgg   gc      uccUGCU UC CU UGCGC UCUU GGGCUC   ggcccu g
          ||||  |||||||   ||      ||||||| || || ||||| |||| ||||||   ||||||  
          cgga  gguuguc   cg      aggguga ag gg gcgcg agaa ucuggg   cuggga c
------cuca    ag       -ua  ---cac       c  u  u     c    g      aga      g 


Annotation confidence Not enough data
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Genome context
chr13: 8502737-8502869 [-]

Database links

Mature eca-miR-9127

Accession MIMAT0034678
Description Equus caballus eca-miR-9127 mature miRNA
Sequence 36 - UGCUUCUCUUGCGCUCUUGGGCUC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545