Stem-loop eca-mir-2483

Accession

MI0028333

Description

Equus caballus eca-mir-2483 precursor miRNA

Gene family

MIPF0001532; mir-2483

Sequence

33 reads, 5 reads per million, 1 experiments

ggcuguaucuagaugacacccaaaaaugugagugaaaaguUCUGUCAACCAUCCAGCUGUUUGGggugaugcaaacaaacaucuaguugguugagagaauuuuuuacuuagucucuggguguuuuggagucauuuaacaggcu
(.((((...(((((((((((((......(((((((((((((((.(((((((.(.((.((((((............)))))).)).).))))))).))))))))))))))).....)))))........)))))))))))).).

Structure

- g    auc        --------     aaaaug               G       U C  C      Gggug 
 g cugu   uagaugac        accca      ugagugaaaaguUCU UCAACCA C AG UGUUUG     a
 | ||||   ||||||||        |||||      ||||||||||||||| ||||||| | || ||||||      
 c gaca   auuuacug        ugggu      auucauuuuuuaaga aguuggu g uc acaaac     u
u g    ---        agguuuug     -cucug               g       u a  u      aaacg 

Annotation confidence Not enough data

Genome context

chrX: 99522548-99522690 [-]

Mature eca-miR-2483

• Accession: MIMAT0034700
• Description: Equus caballus eca-miR-2483 mature miRNA
• Sequence: 41 - UCUGUCAACCAUCCAGCUGUUUGG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545