miRBase entry: eca-mir-8908g-1

Stem-loop eca-mir-8908g-1


Accession
MI0028353
Description
Equus caballus eca-mir-8908g-1 precursor miRNA
Gene family
MIPF0001890; mir-8908


Sequence

483 reads, 73 reads per million, 1 experiments
ugcagugcccUACCCAGUAAGGUACUGAUCACUUacuuagacuacaugugaucagugccugucuggguggaguaaugcucuaa
.(((.(((.((((((((..(((((((((((((...............)))))))))))))..)))))))).))).))).....

Structure
----u   g   c        UA             UUacuu 
     gca ugc cUACCCAG  AGGUACUGAUCAC      a
     ||| ||| ||||||||  |||||||||||||      g
     cgu aug gguggguc  uccgugacuagug      a
aaucu   a   a        ug             uacauc 


Annotation confidence Not enough data
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Genome context
chrX: 115869760-115869842 [-]
Clustered miRNAs
18 other miRNAs are < 10 kb from eca-mir-8908g-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-8908g

Accession MIMAT0034708
Description Equus caballus eca-miR-8908g mature miRNA
Sequence 11 - UACCCAGUAAGGUACUGAUCACUU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545