miRBase entry: eca-mir-9144

Stem-loop eca-mir-9144


Accession
MI0028366
Description
Equus caballus eca-mir-9144 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
cguaacuccuugcugcacaaagccucgcacgagagcgccaUCUGACAGGAGGGCCCGGGGUCCCCcgccagcccugcgggggccuccccagugggcccacgugaagauagggagccucuuaggccagaaggggugcagauagccu
........((..((((((.....((.((..((((((.((((((..((.(.((((((((((.(((((((.......)))))))...))))...)))))).).)).)))).))..).)))))..)).)).....))))))..))...

Structure
cguaacuc  ug      aaagc  c  ac     - -g  -    GA  G A      ---    --U       ca 
        cu  cugcac     cu gc  gagag c  cc aUCU  CA G GGGCCC   GGGG   CCCCcgc  g
        ||  ||||||     || ||  ||||| |  || ||||  || | ||||||   ||||   |||||||  c
        ga  gacgug     ga cg  uucuc g  gg uaga  gu c cccggg   cccc   gggggcg  c
-----ucc  ua      gggaa  c  ga     c ag  a    -a  g a      uga    ucc       uc 


Annotation confidence Not enough data
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Genome context
chr15: 11794771-11794915 [-]

Database links

Mature eca-miR-9144

Accession MIMAT0034720
Description Equus caballus eca-miR-9144 mature miRNA
Sequence 41 - UCUGACAGGAGGGCCCGGGGUCCCC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545