miRBase entry: eca-mir-9149

Stem-loop eca-mir-9149


Accession
MI0028372
Description
Equus caballus eca-mir-9149 precursor miRNA


Sequence

99 reads, 4 reads per million, 1 experiments
ucccccgaugggcaaggcguuucuccuggcUCUUAAGGAUCAUGGACAGUGCCCUgugcuaggagcuaagaggcgaguguucugguucuuacuggugaucauuggaugucauugucccuuggcuu
....((((.(((((((((((((....(.(((..(((((((((.(((((.((((((..(((...)))..)).))).).))))))))))))))..))).).....))))))).)))))).))))...

Structure
uccc    u      -       -cucc g   CU         U     G -   -  gu   a 
    ccga gggcaa ggcguuu     u gcU  UAAGGAUCA GGACA U GCC CU  gcu  
    |||| |||||| |||||||     | |||  ||||||||| ||||| | ||| ||  ||| g
    gguu ccuguu cuguagg     a ugg  auucuuggu cuugu a cgg ga  cga  
-uuc    c      a       uuacu g   uc         -     g g   a  au   g 


Annotation confidence Not enough data
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Genome context
chr15: 28930746-28930870 [-]

Database links

Mature eca-miR-9149

Accession MIMAT0034725
Description Equus caballus eca-miR-9149 mature miRNA
Sequence 31 - UCUUAAGGAUCAUGGACAGUGCCCU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545