Stem-loop eca-mir-9152

Accession

MI0028375

Description

Equus caballus eca-mir-9152 precursor miRNA

Sequence

18 reads, 2 reads per million, 1 experiments

ggcccaguggcgcagugguuaggugcacacauuccgcuuuggcagccugggguuugucaguucagauCCCGGGUGUGGACGUGGUCCCGcuuggcaagccaugcuguggcaggggucac
(((((..((.((((((((((...(((.......((((.((.(((.(((((((((((......)))))))))))))).)).)))).........)))))))..)))))).)).)))))..

Structure

--     ag  g      --    agg   --acacauu    u  g   g           uc 
  ggccc  ug cgcagu  gguu   ugc         ccgc uu gca ccugggguuug  a
  |||||  || ||||||  ||||   |||         |||| || ||| |||||||||||   
  cuggg  ac gugucg  ccga   acg         GGUG AG UGU GGGCCCuagac  g
ca     -g  g      ua    ---   guucGCCCU    C  G   -           uu 

Annotation confidence Not enough data

Genome context

chr15: 32333393-32333511 [+]

Mature eca-miR-9152

• Accession: MIMAT0034728
• Description: Equus caballus eca-miR-9152 mature miRNA
• Sequence: 68 - CCCGGGUGUGGACGUGGUCCCG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545