Stem-loop eca-mir-9156

Accession

MI0028379

Description

Equus caballus eca-mir-9156 precursor miRNA

Sequence

6 reads, 1 reads per million, 1 experiments

guccgagguucuuggagaagcuggcUCUAGGGCGCCUGUGAAGAUGGUcuuucuugagccucgccuucugcgcacgcgccguccuggcagcgccgagcccgacgucuguau
(((.(.(((((..((....((((.(...(.(((((.((((.(((.((((((....)))....))).))).)))).))))).)...).)))).)))))))))))........

Structure

--------   c a     uu  agaa    g UCU G     C    A   U   ----   u 
        guc g gguuc  gg    gcug c   A GGCGC UGUG AGA GGU    cuu c
        ||| | |||||  ||    |||| |   | ||||| |||| ||| |||    |||  
        cag c ccgag  cc    cgac g   u ccgcg acgc ucu ccg    gag u
uaugucug   - -     --  ---g    g ucc g     c    g   u   cucc   u 

Annotation confidence Not enough data

Genome context

chr14: 26942941-26943051 [+]

Mature eca-miR-9156

• Accession: MIMAT0034732
• Description: Equus caballus eca-miR-9156 mature miRNA
• Sequence: 26 - UCUAGGGCGCCUGUGAAGAUGGU - 48
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545